Current CV

Publications

Career

Artieri CG, Haverty C, Evans EA, Goldberg JD, Haque IS, Yaron Y, Muzzey D. 2017. Noninvasive Prenatal Screening at Low Fetal Fraction: Comparing Whole- Genome Sequencing and Single-Nucleotide Polymorphism Methods. Under review. Biorxiv link

Postdoc

Artieri CG*, Naor A*, Turgeman-Grott I, Zhou Y, York R, Gophna R, Fraser HB. 2017. Cis-regulatory adaptation in prokaryotes revealed by interspecific archaeal hybrids. Under review. Biorxiv link. (*co-first authors.)

Naranjo S, Smith JD, Artieri CG, Zhang M, Zhou Y, Palmer ME, Fraser HB. 2015. Dissecting the Genetic Basis of a Complex cis-Regulatory Adaptation. PLoS Genetics. 2015 11:e1005751.

Artieri CG, Fraser HB. 2014. Accounting for biases in riboprofiling data indicates a major role for proline in stalling translation. Genome Research 24:2011-21.

Artieri CG, Fraser HB. 2014. Transcript length mediates developmental timing of gene expression across DrosophilaMolecular Biology and Evolution 31:2879-89.

Chen ZX, Sturgill D, Qu J, Huaiyang J, Park S, Boley N, Suzuki AM, Fletcher AR, Platchetzki, Fitzgerald PJ, Artieri CG, and 47 co-­authors. 2014. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research 24: 1209-1223.

Artieri CG, Fraser HB. 2014. Evolution at two levels of gene expression in yeast. Genome Research 24: 411-421.

Commentary in Nature Reviews Genetics.

Malone JH, Cho DY, Mattiuzzo NR, Artieri CG, Jiang L, Dale RK, Smith HE, McDaniel J, Munro S, Salit M, Andrews J, Przytycka TM, Oliver B. 2012. Mediation of Drosophila autosomal dosage effects and compensation by network interactions. Genome Biology 13: R28.

Artieri CG. 2012. The rapid evolution of gene expression. in Rapidly Evolving Genes and Genetic Systems, RJ Kulathinal, JP Xu, and RS Singh, eds. Oxford  University Press, Oxford, United Kingdom. 281 p. (book is available here). 

Graveley BR*, Brooks AN*, Carlson JW*, Duff MO*, Landolin JM*, Yang Li*, Artieri CG and 40 co-authors. The developmental transcriptome of Drosophila melanogaster. Nature 471: 473–479. ( *co-first authors.)

The ModENCODE Consortium. 2010. Identification of Functional Elements and Regulatory Circuits by Drosophila ModENCODE. Science 330: 1787-1797.

Ph.D.

Artieri CG, Singh RS. 2010. Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila. BMC Biology 8: 2. 

Singh RS, Artieri CG. 2010. Male sex drive and the maintenance of sex: evidence from Drosophila. Journal of Heredity 101 Suppl 1: S100-106.

Artieri CG, Singh RS. 2010. Demystifying phenotypes: The comparative genomics of evo-devo. Fly (Austin). 4: 18-20.

Artieri CG, Haerty W, Singh RS. 2009. Ontogeny and phylogeny: molecular signatures of selection, constraint, and temporal pleiotropy in the development of Drosophila. BMC Biology 7: 42.

Commentary in Journal of Biology (Garfield and Wray 2009).

Faculty of 1000 recommendation: http://f1000.com/prime/1164405

Haerty W, Artieri C, Khezri N, Singh RS, Gupta BP. 2008. Comparative analysis of function and interaction of transcription factors in nematodes: extensive conservation of orthology coupled to rapid sequence evolution. BMC Genomics 9 :399.

Artieri CG, Haerty W, Gupta BP, Singh RS. 2008. Sexual selection and maintenance of sex: evidence from comparisons of rates of genomic accumulation of mutations and divergence of sex-related genes in sexual and hermaphroditic species of Caenorhabditis. Molecular Biology and Evolution 25: 972-979.

Haerty W, Jagadeeshan S, Kulathinal RJ, Wong A, Ravi Ram K, Sirot LK, Levesque L, Artieri CG, Wolfner MF, Civetta A, Singh RS. 2007. Evolution in the fast lane: rapidly evolving sex-related genes in Drosophila. Genetics 177: 1321-1335.

Artieri CG*, Haerty W*, Singh RS. 2007. Association between levels of coding sequence divergence and gene misregulation in Drosophila male hybrids. Journal of Molecular Evolution 65: 697-704. (* co-first authors.)

Drosophila 12 Genomes Consortium. 2007. Evolution of genes and genomes on the Drosophila phylogeny. Nature 450: 203-218.

M.Sc.

Artieri CG, Mitchell LA, Ng SH, Parisotto SE, Danzmann RG, Hoyheim B, Phillips RB, Morasch M, Koop BF, Davidson WS. 2006. Identification of the sex-determining locus of Atlantic salmon (Salmo salar) on chromosome 2. Cytogenetics and Genome Research 112: 152-159.

Ng SH, Artieri CG, Bosdet IE, Chiu R, Danzmann RG, Davidson WS, Ferguson MM, Fjell CD, Hoyheim B, Jones SJ, de Jong PJ, Koop BF, Krzywinski MI, Lubieniecki K, Marra MA, Mitchell LA, Mathewson C, Osoegawa K, Parisotto SE, Phillips RB, Rise ML, von Schalburg KR, Schein JE, Shin H, Siddiqui A, Thorsen J, Wye N, Yang G, Zhu B. 2005. A physical map of the genome of Atlantic salmon, Salmo salar.  Genomics 86: 396-404.